version_number_image
 
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
pyrE
Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) (By similarity) (185 aa)
(Bradyrhizobium sp. BTAi1)
Predicted Functional Partners:
pyrF
Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'- monophosph [...] (243 aa)
     0.989
pyrD
dihydro-orotate oxidase, FMN-linked (UMP biosynthesis) (364 aa)
     0.979
prs
Ribose-phosphate pyrophosphokinase (317 aa)
       0.917
pyrB
aspartate carbamoyltransferase (catalytic subunit) (317 aa)
      0.808
purD
Phosphoribosylamine--glycine ligase (427 aa)
      0.798
pyrH
Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP (By similarity) (238 aa)
      0.713
argF
ornithine carbamoyltransferase (OTCase) (308 aa)
       0.699
carB
carbamoyl phosphate synthase, large subunit (1154 aa)
     0.681
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate (By similari [...] (322 aa)
      0.676
pyrC
dihydroorotase (DHOase) (433 aa)
      0.669
 
  Views:                    
   Neighborhood  Fusion  Occurence  Coexpression  Experiments  Database  Textmining      Summary Network

 

Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:

additional (white) nodes         or: network depth