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This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
luxS
S-ribosylhomocysteine lyase; Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD) (By similarity) (154 aa)
(Dichelobacter nodosus)
Predicted Functional Partners:
pfs
MTA-SAH nucleosidase (229 aa)
     0.957
metK
S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine from methionin [...] (382 aa)
      0.703
DNO_0394
Peptidase, U32 family (434 aa)
       0.651
uvrB
UvrABC system protein B; The UvrABC repair system catalyzes the recognition and processing of D [...] (669 aa)
      0.635
DNO_0293
Glycerol-3-phosphate dehydrogenase (331 aa)
       0.626
DNO_0342
Putative uncharacterized protein (223 aa)
       0.583
ackA
Acetate kinase (394 aa)
       0.550
folD
Bifunctional protein folD; Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-m [...] (291 aa)
       0.536
metF
5,10-methylenetetrahydrofolate reductase (293 aa)
      0.523
gshA
Glutamate--cysteine ligase (512 aa)
       0.515
 
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Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
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additional (white) nodes         or: network depth