hemF protein (Legionella pneumophila Corby) - STRING interaction network

This is the evidence view. Different line colors represent the types of evidence for the association.




confidence	evidence	actions	interactive	advanced	more	less	save

Your Input:
	hemF	oxygen-dependent coproporphyrinogen III oxidase (311 aa)
		(Legionella pneumophila Corby)
Predicted Functional Partners:
	hemE	Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporp [...] (352 aa)	•	•	•	•	0.979
	hemC	Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbil [...] (321 aa)	•			•	0.815
	hemB	Delta-aminolevulinic acid dehydratase (331 aa)	•			•	0.719
	purD	Phosphoribosylamine-glycine ligase (439 aa)	•				0.691
	greA	Transcription elongation factor greA; Necessary for efficient RNA polymerase transcription elon [...] (160 aa)	•				0.672
	LPC_0108	UPF0178 protein LPC_0108 (148 aa)	•				0.671
	LPC_1978	RNA methyltransferase TrmH family, group 2 (155 aa)	•				0.667
	fmt	Methionyl-tRNA formyltransferase; Modifies the free amino group of the aminoacyl moiety of meth [...] (314 aa)	•				0.667
	yebC	YebC (247 aa)	•				0.663
	aroE	shikimate-5-dehydrogenase (265 aa)	•				0.659

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Info & Parameters ...

Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:

Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining

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