version_number_image
 
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
tyrS
Tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction- tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) (By similarity) (420 aa)
(Staphylococcus aureus JH9)
Predicted Functional Partners:
gltX
Glutamyl-tRNA synthetase (484 aa)
     0.714
rplS
50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface a [...] (116 aa)
       0.712
glyQS
Glycyl-tRNA synthetase (463 aa)
       0.682
SaurJH9_1649
Iojap-like protein (117 aa)
       0.668
smpB
SsrA-binding protein; Binds specifically to the ssrA RNA (tmRNA) and is required for stable ass [...] (154 aa)
       0.650
valS
Valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadverten [...] (876 aa)
       0.649
SaurJH9_0995
Tryptophanyl-tRNA synthetase (329 aa)
      0.641
SaurJH9_0846
SUF system FeS assembly protein, NifU family (154 aa)
       0.634
SaurJH9_1797
T-RNA-binding domain protein (198 aa)
       0.633
SaurJH9_1720
FolC bifunctional protein (423 aa)
      0.625
 
  Views:                    
   Neighborhood  Fusion  Occurence  Coexpression  Experiments  Database  Textmining      Summary Network

 

Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:

additional (white) nodes         or: network depth