version_number_image
 
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
nagZ
Beta-hexosaminidase; Cleaves GlcNAc linked beta-1,4 to MurNAc tripeptides (By similarity) (350 aa)
(Haemophilus influenzae PittEE)
Predicted Functional Partners:
rumB
23S rRNA (uracil-5-)-methyltransferase rumB; Catalyzes the formation of 5-methyl-uridine at pos [...] (392 aa)
       0.872
HI0960
Uncharacterized protein HI0960 (116 aa)
       0.864
HI0961
HIT-like protein HI0961 (116 aa)
       0.864
rnc
Ribonuclease 3; Digests double-stranded RNA. Involved in the processing of ribosomal RNA precur [...] (227 aa)
       0.663
CGSHiEE_01370
DNA repair protein recO; Involved in DNA repair and recF pathway recombination (By similarity) (236 aa)
       0.641
hpt
Hypoxanthine-guanine phosphoribosyltransferase; This enzyme acts exclusively on hypoxanthine; i [...] (179 aa)
       0.610
pfkA
6-phosphofructokinase (321 aa)
       0.604
CGSHiEE_03020
UvrABC system protein C; The UvrABC repair system catalyzes the recognition and processing of D [...] (609 aa)
       0.589
lepA
GTP-binding protein lepA (598 aa)
       0.583
CGSHiEE_06430
Oligopeptide permease ABC transporter membrane component; Part of the binding-protein-dependent [...] (306 aa)
       0.568
 
  Views:                    
   Neighborhood  Fusion  Occurence  Coexpression  Experiments  Database  Textmining      Summary Network

 

Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:

additional (white) nodes         or: network depth