dapA protein (Bacteroides vulgatus ATCC 8482)

This is the evidence view. Different line colors represent the types of evidence for the association.




confidence	evidence	actions	interactive	advanced	more	less	save

Your Input:
	dapA	putative dihydrodipicolinate synthase (297 aa)
		(Bacteroides vulgatus ATCC 8482)
Predicted Functional Partners:
	BVU_1257	Dihydrodipicolinate reductase (251 aa)	•	•		•	•	0.990
	BVU_0205	Aspartate-semialdehyde dehydrogenase (336 aa)	•			•	•	0.958
	BVU_3857	Diaminopimelate decarboxylase (386 aa)	•	•			•	0.912
	BVU_3856	Aspartokinase (439 aa)	•	•			•	0.877
	dapF	Diaminopimelate epimerase (280 aa)	•	•	•			0.802
	ligA	DNA ligase; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosp [...] (665 aa)	•					0.755
	smpB	SsrA-binding protein; Binds specifically to the ssrA RNA (tmRNA) and is required for stable ass [...] (150 aa)	•					0.733
	BVU_1174	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine (148 aa)	•					0.716
	BVU_3071	Putative metallo-beta-lactamase superfamily hydrolase (267 aa)	•					0.713
	pnp	Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Hydrolyzes single-stra [...] (711 aa)	•		•			0.706

Views:

Info & Parameters ...

Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:

Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining

required confidence (score):

interactors shown:

or custom value:

or custom limit:

additional (white) nodes		or: network depth