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This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
ribH
6,7-dimethyl-8-ribityllumazine synthase; Riboflavin synthase is a bifunctional enzyme complex catalyzing the formation of riboflavin from 5-amino-6-(1'-D)- ribityl-amino-2,4(1H,3H)-pyrimidinedione and L-3,4-dihydrohy-2- butanone-4-phosphate via 6,7-dimethyl-8-lumazine. The beta subunit catalyzes the condensation of 5-amino-6-(1'-D)-ribityl-amino- 2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4- phosphate yielding 6,7-dimethyl-8-lumazine (By similarity) (153 aa)
(Alkaliphilus metalliredigens)
Predicted Functional Partners:
Amet_1020
GTP cyclohydrolase II (403 aa)
   0.999
Amet_1019
Riboflavin synthase, alpha subunit (218 aa)
    0.996
Amet_1018
Riboflavin biosynthesis protein RibD (366 aa)
    0.987
Amet_2501
NusB antitermination factor; Involved in the transcription termination process (129 aa)
       0.800
nrdR
Transcriptional repressor nrdR; Negatively regulates transcription of bacterial ribonucleotide [...] (155 aa)
       0.794
glyA
Serine hydroxymethyltransferase; Interconversion of serine and glycine (410 aa)
       0.779
mnmA
tRNA-specific 2-thiouridylase mnmA; Catalyzes the 2-thiolation of uridine at the wobble positio [...] (369 aa)
      0.755
def
Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized prot [...] (147 aa)
       0.749
Amet_2669
Riboflavin biosynthesis protein RibF (307 aa)
      0.739
Amet_0338
Sugar-phosphate isomerase, RpiB/LacA/LacB family (149 aa)
       0.712
 
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Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
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