version_number_image
 
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
lexA
LexA repressor; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, recA interacts with lexA causing an autocatalytic cleavage which disrupts the DNA-binding part of lexA, leading to derepression of the SOS regulon and eventually DNA repair (By similarity) (206 aa)
(Alkaliphilus metalliredigens)
Predicted Functional Partners:
Amet_2658
Protein recA; Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the AT [...] (347 aa)
    0.980
Amet_4216
DNA-directed DNA polymerase (367 aa)
      0.734
Amet_4127
UvrABC system protein B; The UvrABC repair system catalyzes the recognition and processing of D [...] (664 aa)
      0.642
Amet_0808
Putative metalloendopeptidase, glycoprotease family (359 aa)
       0.635
gltX
Glutamyl-tRNA synthetase (493 aa)
       0.628
Amet_0338
Sugar-phosphate isomerase, RpiB/LacA/LacB family (149 aa)
       0.624
Amet_0110
Methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also fo [...] (655 aa)
       0.618
Amet_2534
Phage integrase family protein (372 aa)
       0.601
Amet_2212
Anti-sigma factor antagonist (111 aa)
       0.600
Amet_0007
DNA gyrase, A subunit (830 aa)
       0.586
 
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Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:

additional (white) nodes         or: network depth