version_number_image
 
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
pepA
Probable cytosol aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides (By similarity) (500 aa)
(Alkaliphilus metalliredigens)
Predicted Functional Partners:
Amet_2904
ATP--cobalamin adenosyltransferase (176 aa)
       0.715
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of A [...] (170 aa)
     0.700
Amet_1402
Valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadverten [...] (884 aa)
       0.696
Amet_0338
Sugar-phosphate isomerase, RpiB/LacA/LacB family (149 aa)
       0.689
Amet_0924
Phosphoribosylglycinamide formyltransferase (218 aa)
       0.660
Amet_2896
GTP-binding protein YchF (364 aa)
       0.655
Amet_3468
Glucose-6-phosphate 1-dehydrogenase (454 aa)
      0.639
groL
60 kDa chaperonin; Prevents misfolding and promotes the refolding and proper assembly of unfold [...] (547 aa)
       0.636
argF
Ornithine carbamoyltransferase (330 aa)
      0.632
Amet_3334
Branched-chain amino acid aminotransferase (341 aa)
       0.611
 
  Views:                    
   Neighborhood  Fusion  Occurence  Coexpression  Experiments  Database  Textmining      Summary Network

 

Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:

additional (white) nodes         or: network depth