version_number_image
 
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
rocA
putative delta-1-pyrroline-5-carboxylate dehydrogenase (514 aa)
(Staphylococcus aureus JH1)
Predicted Functional Partners:
SaurJH1_1854
Proline dehydrogenase (333 aa)
    0.977
katA
Catalase; Decomposes hydrogen peroxide into water and oxygen; serves to protect cells from the [...] (505 aa)
      0.589
SaurJH1_2631
Transferase hexapeptide repeat containing protein (199 aa)
       0.500
odhA
2-oxoglutarate dehydrogenase E1 component; The 2-oxoglutarate dehydrogenase complex catalyzes t [...] (932 aa)
      0.479
SaurJH1_1229
Succinate dehydrogenase or fumarate reductase, flavoprotein subunit (588 aa)
       0.453
SaurJH1_0976
Ornithine aminotransferase (396 aa)
     0.433
SaurJH1_1823
AMP-dependent synthetase and ligase (568 aa)
       0.424
SaurJH1_0175
Ornithine aminotransferase (394 aa)
     0.422
sdhB
succinate dehydrogenase and fumarate reductase iron-sulfur protein (271 aa)
       0.402
 
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Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:

additional (white) nodes         or: network depth