version_number_image
 
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
pdxH
Pyridoxine/pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) (By similarity) (210 aa)
(Actinobacillus succinogenes)
Predicted Functional Partners:
pdxY
Pyridoxamine kinase; Phosphorylates B6 vitamers; functions in a salvage pathway. Uses pyridoxam [...] (286 aa)
     0.921
Asuc_0248
protein of unknown function DUF339 (83 aa)
       0.840
mutM
Formamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidati [...] (270 aa)
       0.776
Asuc_1827
Tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reacti [...] (395 aa)
      0.725
Asuc_1512
Single-stranded-DNA-specific exonuclease RecJ (558 aa)
       0.659
hemL
Glutamate-1-semialdehyde 2,1-aminomutase (427 aa)
       0.655
Asuc_1190
N-isopropylammelide isopropylaminohydrolase (420 aa)
       0.649
Asuc_0246
TrkA-N domain protein (458 aa)
       0.618
Asuc_0209
Histidine triad (HIT) protein (117 aa)
       0.617
glmM
Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1 [...] (444 aa)
       0.591
 
  Views:                    
   Neighborhood  Fusion  Occurence  Coexpression  Experiments  Database  Textmining      Summary Network

 

Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:

additional (white) nodes         or: network depth