version_number_image
 
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
aroE
shikimate 5-dehydrogenase (269 aa)
(Actinobacillus succinogenes)
Predicted Functional Partners:
Asuc_0263
3-dehydroquinate synthase (362 aa)
   0.994
aroK
Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic ac [...] (175 aa)
    0.991
aroA
3-phosphoshikimate 1-carboxyvinyltransferase (433 aa)
    0.986
aroC
Chorismate synthase (360 aa)
     0.958
Asuc_0641
3-dehydroquinate dehydratase, type II; Catalyzes a trans-dehydration via an enolate intermediat [...] (149 aa)
     0.936
rimN
Putative ribosome maturation factor rimN; Required for the maturation of 16S rRNA. May keep an [...] (183 aa)
      0.881
Asuc_0339
DNA topoisomerase type IA zn finger domain protein (182 aa)
       0.869
Asuc_1272
Anthranilate synthase component I (513 aa)
      0.821
Asuc_1569
Chorismate mutase (375 aa)
      0.811
kdsA
2-dehydro-3-deoxyphosphooctonate aldolase (284 aa)
       0.769
 
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Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:

additional (white) nodes         or: network depth