version_number_image
 
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
ispH
4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Converts 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP) (By similarity) (314 aa)
(Actinobacillus succinogenes)
Predicted Functional Partners:
ispG
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclo [...] (371 aa)
  •  •• 0.994
Asuc_1552
Ribosomal protein S1 (550 aa)
••      0.977
lspA
Lipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptide [...] (163 aa)
•  •    0.953
Asuc_1372
Deoxyxylulose-5-phosphate synthase (617 aa)
• •   • 0.861
Asuc_0657
1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and [...] (395 aa)
• •   • 0.854
Asuc_1876
Isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can in [...] (915 aa)
•       0.832
ispF
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Converts 4-diphosphocytidyl-2-C-methyl-D [...] (158 aa)
  •   • 0.807
cmk
Cytidylate kinase (227 aa)
•       0.799
Asuc_1877
Riboflavin biosynthesis protein RibF (317 aa)
•       0.792
ispD
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the formation of 4-diphosph [...] (237 aa)
  •   • 0.782
 
  Views:                    
   Neighborhood  Fusion  Occurence  Coexpression  Experiments  Database  Textmining      Summary Network

 

Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.
Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:
additional (white) nodes         or: network depth