lpxA protein (Actinobacillus succinogenes) - STRING interaction network

This is the evidence view. Different line colors represent the types of evidence for the association.




confidence	evidence	actions	interactive	advanced	more	less	save

Your Input:
	lpxA	Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell (By similarity) (262 aa)
		(Actinobacillus succinogenes)
Predicted Functional Partners:
	Asuc_1893	Lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosa [...] (389 aa)	•	•				•		0.992
	fabZ	(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; Involved in saturated fatty acids bio [...] (150 aa)	•		•		•	•		0.984
	lpxC	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Involved in the biosynthesis of l [...] (305 aa)	•	•			•			0.983
	Asuc_1962	UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase (341 aa)	•	•	•	•	•	•	•	0.920
	rnhB	Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA- DNA hybrids (By simil [...] (202 aa)	•			•		•		0.903
	lpxK	Tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a t [...] (325 aa)	•	•						0.865
	Asuc_1862	DNA polymerase III, alpha subunit (1158 aa)	•					•		0.854
	Asuc_0676	Three-deoxy-D-manno-octulosonic-acid transferase domain protein (422 aa)	•	•						0.829
	glmU	Bifunctional protein glmU; Catalyzes the last two sequential reactions in the de novo biosynthe [...] (454 aa)	•					•		0.811
	Asuc_1964	Surface antigen (D15) (787 aa)	•							0.792

Views:

Info & Parameters ...

Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:

Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining

required confidence (score):

interactors shown:

or custom value:

or custom limit:

additional (white) nodes		or: network depth