version_number_image
 
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
pth
Peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis (By similarity) (186 aa)
(Bacillus cereus cytotoxis)
Predicted Functional Partners:
Bcer98_0045
Ribose-phosphate pyrophosphokinase (317 aa)
•   • • 0.933
glmU
Bifunctional protein glmU; Catalyzes the last two sequential reactions in the de novo biosynthe [...] (459 aa)
•       0.903
Bcer98_0048
Transcription-repair coupling factor (1176 aa)
•       0.869
rpsR
30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the [...] (77 aa)
• •     0.837
Bcer98_4015
GTP-binding protein YchF (366 aa)
•     • 0.836
ispE
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the positio [...] (289 aa)
•       0.816
rpsF
30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA (By similarity) (95 aa)
•       0.790
rplI
50S ribosomal protein L9; Binds to the 23S rRNA (By similarity) (148 aa)
•       0.785
rplA
50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribos [...] (230 aa)
• •     0.778
Bcer98_0060
ATP-dependent metalloprotease FtsH (639 aa)
•       0.776
 
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Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.
Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:
additional (white) nodes         or: network depth