version_number_image
 
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
aroE
shikimate 5-dehydrogenase (277 aa)
(Bacillus cereus cytotoxis)
Predicted Functional Partners:
Bcer98_1240
3-dehydroquinate synthase (369 aa)
   0.994
aroK
Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic ac [...] (165 aa)
   0.994
aroA
3-phosphoshikimate 1-carboxyvinyltransferase (424 aa)
    0.986
aroC
Chorismate synthase (390 aa)
     0.948
aroQ
3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate (By sim [...] (146 aa)
     0.944
Bcer98_3062
HAD superfamily (Subfamily IIIA) phosphatase, TIGR01668 (170 aa)
       0.929
Bcer98_0064
Anthranilate synthase (465 aa)
      0.905
Bcer98_3059
protein of unknown function UPF0044 (96 aa)
       0.859
Bcer98_3149
Prephenate dehydratase (283 aa)
     0.829
Bcer98_3061
Nitric-oxide synthase (368 aa)
       0.813
 
  Views:                    
   Neighborhood  Fusion  Occurence  Coexpression  Experiments  Database  Textmining      Summary Network

 

Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:

additional (white) nodes         or: network depth