pth protein (Anaeromyxobacter sp. Fw109-5) - STRING interaction network

This is the evidence view. Different line colors represent the types of evidence for the association.




confidence	evidence	actions	interactive	advanced	more	less	save

Your Input:
	pth	Peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis (By similarity) (192 aa)
		(Anaeromyxobacter sp. Fw109-5)
Predicted Functional Partners:
	rplY	50S ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome [...] (235 aa)	•		•		•	0.975
	rpsR	30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the [...] (143 aa)	•	•				0.924
	rplI	50S ribosomal protein L9; Binds to the 23S rRNA (By similarity) (149 aa)	•	•				0.895
	Anae109_0125	Ribose-phosphate pyrophosphokinase (321 aa)	•			•	•	0.894
	Anae109_4484	GTP-binding protein YchF (370 aa)	•	•			•	0.859
	ispE	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the positio [...] (305 aa)	•					0.835
	frr	Ribosome-recycling factor; Responsible for the release of ribosomes from messenger RNA at the t [...] (187 aa)		•			•	0.801
	Anae109_0122	Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA (150 aa)	•					0.794
	Anae109_4478	Transcription-repair coupling factor (1229 aa)	•					0.790
	glmU	Bifunctional protein glmU; Catalyzes the last two sequential reactions in the de novo biosynthe [...] (487 aa)	•					0.788

Views:

Info & Parameters ...

Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:

Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining

required confidence (score):

interactors shown:

or custom value:

or custom limit:

additional (white) nodes		or: network depth