version_number_image
 
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
trmD
tRNA (guanine-N(1)-)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs (By similarity) (248 aa)
(Anaeromyxobacter sp. Fw109-5)
Predicted Functional Partners:
rplS
50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface a [...] (134 aa)
    0.996
rpsP
30S ribosomal protein S16 (88 aa)
    0.973
rimM
Ribosome maturation factor rimM; An accessory protein needed during the final step in the assem [...] (165 aa)
     0.961
Anae109_1942
Putative uncharacterized protein (76 aa)
       0.921
smpB
SsrA-binding protein; Binds specifically to the ssrA RNA (tmRNA) and is required for stable ass [...] (165 aa)
      0.896
rnhB
Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA- DNA hybrids (By simil [...] (338 aa)
      0.866
Anae109_3368
Signal recognition particle protein (550 aa)
      0.818
rpsC
30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S r [...] (224 aa)
     0.776
Anae109_0770
Primosomal protein N' (735 aa)
      0.775
Anae109_0718
Signal recognition particle-docking protein FtsY (465 aa)
       0.761
 
  Views:                    
   Neighborhood  Fusion  Occurence  Coexpression  Experiments  Database  Textmining      Summary Network

 

Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:

additional (white) nodes         or: network depth