version_number_image
 
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
lexA
LexA repressor; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, recA interacts with lexA causing an autocatalytic cleavage which disrupts the DNA-binding part of lexA, leading to derepression of the SOS regulon and eventually DNA repair (By similarity) (231 aa)
(Anaeromyxobacter sp. Fw109-5)
Predicted Functional Partners:
Anae109_0456
Protein recA; Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the AT [...] (358 aa)
•  •• • 0.797
Anae109_2200
DNA polymerase III, alpha subunit (1197 aa)
•     • 0.780
Anae109_3750
Protein recA; Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the AT [...] (340 aa)
•  •• • 0.771
Anae109_3808
Pantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an A [...] (289 aa)
• •     0.658
Anae109_4493
DNA gyrase, A subunit (891 aa)
•       0.651
Anae109_2105
Putative uncharacterized protein (302 aa)
•       0.648
Anae109_2493
UvrABC system protein B; The UvrABC repair system catalyzes the recognition and processing of D [...] (729 aa)
•     • 0.638
Anae109_0776
DNA repair protein RecN (611 aa)
  ••  • 0.633
Anae109_2103
Putative uncharacterized protein (112 aa)
•       0.609
gcp
putative metalloendopeptidase, glycoprotease family (333 aa)
•       0.607
 
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Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.
Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:
additional (white) nodes         or: network depth