rph protein (Anaeromyxobacter sp. Fw109-5) - STRING interaction network

This is the evidence view. Different line colors represent the types of evidence for the association.




confidence	evidence	actions	interactive	advanced	more	less	save

Your Input:
	rph	Ribonuclease PH; Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates (By similarity) (238 aa)
		(Anaeromyxobacter sp. Fw109-5)
Predicted Functional Partners:
	Anae109_3424	Nucleoside-triphosphatase; Hydrolyzes non-standard nucleotides such as XTP and dITP/ITP. Might [...] (230 aa)	•	•	•	0.996
	Anae109_0708	Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis (259 aa)	•			0.799
	Anae109_0263	Putative oxygen-independent coproporphyrinogen III oxidase (379 aa)	•			0.792
	Anae109_2317	Phosphodiesterase, MJ0936 family (174 aa)	•			0.718
	Anae109_3426	N-acetylmuramoyl-L-alanine amidase (248 aa)	•			0.684
	Anae109_2574	domain of unknown function DUF1732 (291 aa)	•			0.670
	Anae109_2573	Guanylate kinase; Essential for recycling GMP and indirectly, cGMP (223 aa)	•			0.668
	rpoZ	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and [...] (88 aa)	•			0.651
	Anae109_1311	(P)ppGpp synthetase I, SpoT/RelA; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate [...] (738 aa)	•		•	0.644
	Anae109_4324	Phospholipid/glycerol acyltransferase (200 aa)	•			0.637

Views:

Info & Parameters ...

Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:

Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining

required confidence (score):

interactors shown:

or custom value:

or custom limit:

additional (white) nodes		or: network depth