version_number_image
 
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
trpC
Indole-3-glycerol phosphate synthase (250 aa)
(Bacillus amyloliquefaciens)
Predicted Functional Partners:
trpB
Tryptophan synthase (Beta subunit); The beta subunit is responsible for the synthesis of L- try [...] (400 aa)
  0.999
trpF
N-(5'-phosphoribosyl)anthranilate isomerase (217 aa)
   0.999
trpD
Anthranilate phosphoribosyltransferase (338 aa)
  0.999
trpA
Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of ind [...] (265 aa)
   0.999
trpE
TrpE (515 aa)
   0.998
pabA
PabA (195 aa)
   0.995
pabB
PabB (471 aa)
   0.971
hisA
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomer [...] (245 aa)
     0.879
hisC
Histidinol-phosphate aminotransferase (360 aa)
       0.873
tyrA
TyrA (368 aa)
       0.846
 
  Views:                    
   Neighborhood  Fusion  Occurence  Coexpression  Experiments  Database  Textmining      Summary Network

 

Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:

additional (white) nodes         or: network depth