version_number_image
 
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
thrS
Threonyl-tRNA synthetase (643 aa)
(Bacillus amyloliquefaciens)
Predicted Functional Partners:
thrC
ThrC (352 aa)
      0.958
infC
Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equi [...] (167 aa)
      0.906
tdh
L-threonine 3-dehydrogenase (347 aa)
       0.899
pheS
Phenylalanyl-tRNA synthetase alpha chain (345 aa)
      0.898
rplT
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitr [...] (119 aa)
      0.872
rpmI
50S ribosomal protein L35 (66 aa)
      0.841
folC
FolC (430 aa)
     0.835
pheT
PheT (804 aa)
       0.748
groL
60 kDa chaperonin; Prevents misfolding and promotes the refolding and proper assembly of unfold [...] (544 aa)
       0.729
valS
ValS; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate a [...] (880 aa)
     0.723
 
  Views:                    
   Neighborhood  Fusion  Occurence  Coexpression  Experiments  Database  Textmining      Summary Network

 

Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:

additional (white) nodes         or: network depth