version_number_image
 
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
pyrE
Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) (By similarity) (202 aa)
(Campylobacter concisus)
Predicted Functional Partners:
pyrD
Dihydroorotate oxidase (357 aa)
      0.975
CCC13826_1015
Ribose-phosphate pyrophosphokinase (309 aa)
       0.937
CCC13826_1143
UPF0102 protein Ccon26_01140 (113 aa)
       0.899
CCC13826_0659
Porphyromonas-type peptidyl-arginine deiminase superfamily (322 aa)
       0.899
CCC13826_2089
orotate phosphoribosyltransferase (oprt; oprtase) (996 aa)
       0.800
CCC13826_2040
chaperone protein HtpG (Heat shock protein htpG; High temperatureprotein G) (425 aa)
       0.786
frr
Ribosome-recycling factor; Responsible for the release of ribosomes from messenger RNA at the t [...] (185 aa)
       0.681
CCC13826_1846
putative RDD family (139 aa)
       0.673
CCC13826_0339
putative transcriptional regulator, AraC family (109 aa)
       0.673
pyrB
Aspartate carbamoyltransferase (309 aa)
       0.668
 
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Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
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additional (white) nodes         or: network depth