version_number_image
 
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
poxA
lysyl-tRNA synthetase homolog GenX; Could be a lysyl-tRNA synthetase (325 aa)
(Escherichia coli E24377A)
Predicted Functional Partners:
yjeK
Putative lysine aminomutase (342 aa)
      0.928
efp
Elongation factor EF-P; Involved in peptide bond synthesis. Stimulates efficient translation an [...] (188 aa)
      0.895
poxB
Pyruvate dehydrogenase (Pyruvate oxidase), thiamin-dependent, FAD-binding (572 aa)
       0.623
perM
Putative permease, PerM family (353 aa)
       0.611
gidA
tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG; NAD-binding protein involved [...] (629 aa)
       0.591
ligA
DNA ligase, NAD(+)-dependent; DNA ligase that catalyzes the formation of phosphodiester linkage [...] (671 aa)
       0.589
recJ
single-stranded-DNA-specific exonuclease RecJ (577 aa)
       0.546
pdxB
Erythronate-4-phosphate dehydrogenase; Catalyzes the oxidation of erythronate-4-phosphate to 3- [...] (378 aa)
       0.544
psd
Phosphatidylserine decarboxylase proenzyme (322 aa)
       0.489
coaD
Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4 [...] (159 aa)
       0.484
 
  Views:                    
   Neighborhood  Fusion  Occurence  Coexpression  Experiments  Database  Textmining      Summary Network

 

Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:

additional (white) nodes         or: network depth