def protein (Escherichia coli HS) - STRING interaction network

This is the evidence view. Different line colors represent the types of evidence for the association.




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Your Input:
	def	Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions (By similarity) (169 aa)
		(Escherichia coli HS)
Predicted Functional Partners:
	fmt	10-formyltetrahydrofolate-L-methionyl-tRNA(FMet) N-formyltransferase; Modifies the free amino g [...] (315 aa)	•	•	•	•	•	0.991
	rsmB	Ribosomal RNA small subunit methyltransferase B (429 aa)	•					0.923
	metK	Methionine adenosyltransferase 1; Catalyzes the formation of S-adenosylmethionine from methioni [...] (384 aa)	•	•				0.836
	gmk	Guanylate kinase; Essential for recycling GMP and indirectly, cGMP (207 aa)	•		•			0.815
	rpe	Ribulose-phosphate 3-epimerase (225 aa)	•					0.796
	priA	Primosome factor n' (Replication factor Y) (732 aa)	•					0.791
	smf	Putative uncharacterized protein smf (374 aa)	•					0.790
	smg	Putative uncharacterized protein smg (157 aa)	•					0.772
	aroC	Chorismate synthase (361 aa)	•					0.739
	dfp	Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase (406 aa)	•					0.737

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Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:

Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining

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