ubiC protein (Escherichia coli HS) - STRING interaction network

This is the evidence view. Different line colors represent the types of evidence for the association.




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Your Input:
	ubiC	Chorismate--pyruvate lyase; Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4- hydroxybenzoate (4HB) for the ubiquinone pathway (By similarity) (165 aa)
		(Escherichia coli HS)
Predicted Functional Partners:
	ubiA	p-hydroxybenzoate octaprenyltransferase; Synthesis of 3-octaprenyl-4-hydroxybenzoate (By simila [...] (290 aa)	•		•	•	0.982
	yjbI	Putative uncharacterized protein yjbI (431 aa)	•			•	0.766
	phnF	Putative DNA-binding transcriptional regulator of phosphonate uptake and biodegradation (241 aa)				•	0.613
	malM	Maltose regulon periplasmic protein (306 aa)	•				0.576
	gntR	Transcriptional regulator GntR (331 aa)				•	0.524
	treR	Trehalose operon repressor (315 aa)				•	0.474
	ydjN	Sodium-dicarboxylate symporter family (463 aa)		•			0.470
	rpsF	30S ribosomal subunit protein S6; Binds together with S18 to 16S ribosomal RNA (By similarity) (131 aa)				•	0.456
	recG	ATP-dependent DNA helicase RecG (693 aa)	•				0.455
	ispB	Octaprenyl-diphosphate synthase (323 aa)				•	0.435

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Info & Parameters ...

Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:

Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining

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interactors shown:

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additional (white) nodes		or: network depth