lpxA protein (Arcobacter butzleri) - STRING interaction network

This is the evidence view. Different line colors represent the types of evidence for the association.




confidence	evidence	actions	interactive	advanced	more	less	save

Your Input:
	lpxA	Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell (By similarity) (260 aa)
		(Arcobacter butzleri)
Predicted Functional Partners:
	fabZ	(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; Involved in saturated fatty acids bio [...] (147 aa)	•		•		•	•		0.989
	lpxB	Lipid A disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosa [...] (347 aa)	•	•				•		0.985
	lpxC	UDP-3-O-acyl-N-acetylglucosamine deacetylase; Involved in the biosynthesis of lipid A, a phosph [...] (301 aa)	•	•			•			0.982
	glmU	Bifunctional protein glmU; Catalyzes the last two sequential reactions in the de novo biosynthe [...] (432 aa)	•				•	•		0.956
	lpxD	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (315 aa)	•	•	•	•	•	•	•	0.939
	clpX	ATP-dependent Clp protease, ATP-binding subunit ClpX (407 aa)	•							0.850
	dnaE	DNA polymerase III, alpha subunit (1187 aa)	•					•		0.849
	rnhB	Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA- DNA hybrids (By simil [...] (192 aa)	•			•		•		0.842
	mreC	Rod shape-determining protein MreC (268 aa)	•		•					0.838
	mreB	Rod shape-determining protein MreB (347 aa)	•							0.826

Views:

Info & Parameters ...

Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:

Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining

required confidence (score):

interactors shown:

or custom value:

or custom limit:

additional (white) nodes		or: network depth