lepB protein (Rickettsia canadensis) - STRING interaction network

This is the evidence view. Different line colors represent the types of evidence for the association.




confidence	evidence	actions	interactive	advanced	more	less	save

Your Input:
	lepB	preprotein translocase subunit SecF (265 aa)
		(Rickettsia canadensis)
Predicted Functional Partners:
	rnc	Ribonuclease 3; Digests double-stranded RNA. Involved in the processing of ribosomal RNA precur [...] (227 aa)	•	•	0.973
	era	GTP-binding protein era homolog; Binds both GDP and GTP, has an intrinsic GTPase activity and i [...] (295 aa)	•		0.971
	lepA	GTP-binding protein lepA (600 aa)	•	•	0.868
	acpS	Holo-[acyl-carrier-protein] synthase; Transfers the 4'-phosphopantetheine moiety from coenzyme [...] (131 aa)	•	•	0.810
	A1E_05070	NADH dehydrogenase subunit I (159 aa)	•		0.692
	rnhB	Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA- DNA hybrids (By simil [...] (196 aa)	•		0.686
	secF	Protein-export membrane protein secF; Involved in protein export (By similarity) (310 aa)	•	•	0.669
	rplS	50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface a [...] (138 aa)	•		0.654
	A1E_02225	DNA repair protein RecO; Involved in DNA repair and recF pathway recombination (241 aa)	•		0.647
	A1E_00300	2-dehydro-3-deoxyphosphooctonate aldolase (110 aa)	•		0.639

Views:

Info & Parameters ...

Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:

Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining

required confidence (score):

interactors shown:

or custom value:

or custom limit:

additional (white) nodes		or: network depth