version_number_image
 
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
gltX
Glutamyl-tRNA synthetase (463 aa)
(Rickettsia canadensis)
Predicted Functional Partners:
A1E_00450
Aspartate aminotransferase (196 aa)
       0.899
cysS
Cysteinyl-tRNA synthetase (459 aa)
      0.896
groEL
Chaperonin GroEL (177 aa)
       0.869
A1E_02360
Octaprenyl-diphosphate synthase (327 aa)
      0.766
fni
Isopentenyl-diphosphate delta-isomerase; Catalyzes the 1,3-allylic rearrangement of the homoall [...] (342 aa)
       0.713
A1E_04385
Elongation factor Tu (239 aa)
       0.659
A1E_03125
Threonine dehydratase (561 aa)
       0.659
tyrS
Tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reacti [...] (411 aa)
     0.647
ubiG
3-demethylubiquinone-9 3-methyltransferase (236 aa)
       0.631
lysS
Lysyl-tRNA synthetase (522 aa)
       0.581
 
  Views:                    
   Neighborhood  Fusion  Occurence  Coexpression  Experiments  Database  Textmining      Summary Network

 

Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:

additional (white) nodes         or: network depth