version_number_image
 
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
trpC
Indole-3-glycerol phosphate synthase (250 aa)
(Bacillus pumilus)
Predicted Functional Partners:
trpB
Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptop [...] (399 aa)
•••• •• 0.999
trpF
N-(5'-phosphoribosyl)anthranilate isomerase (219 aa)
•••  •• 0.999
trpA
Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of ind [...] (267 aa)
• •• •• 0.999
trpD
Anthranilate phosphoribosyltransferase (340 aa)
•••• •• 0.999
trpE
Anthranilate synthase component I (515 aa)
• ••••• 0.998
pabA
Anthranilate synthase component II (197 aa)
•••  •• 0.995
pabB
Anthranilate synthase component I (472 aa)
• •• •• 0.972
hisA
1-(5-phosphoribosyl)-5- ((5-phosphoribosylamino)methylideneamino)imidazole-4- carboxamide isome [...] (245 aa)
•    •• 0.888
hisC
bifunctional histidinol-phosphate transaminase/tyrosine transaminase (365 aa)
•       0.869
aroB
3-dehydroquinate synthase (363 aa)
• •     0.840
 
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Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.
Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:
additional (white) nodes         or: network depth