rph protein (Bacillus pumilus) - STRING interaction network

This is the evidence view. Different line colors represent the types of evidence for the association.




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Your Input:
	rph	Ribonuclease PH; Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates (By similarity) (242 aa)
		(Bacillus pumilus)
Predicted Functional Partners:
	ysnA	Nucleoside-triphosphatase (197 aa)	•	•		0.994
	ysnB	Possible phosphoesterase (174 aa)	•			0.901
	murI	Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis (272 aa)	•			0.868
	hemN	Coproporphyrinogen dehydrogenase (379 aa)	•			0.793
	yhfI	Possible metal-dependent hydrolase (247 aa)	•			0.717
	yloC	Putative uncharacterized protein yloC (291 aa)	•			0.674
	thyA	Thymidylate synthase; Provides the sole de novo source of dTMP for DNA biosynthesis (By similar [...] (264 aa)	•			0.673
	gmk	Guanylate kinase; Essential for recycling GMP and indirectly, cGMP (204 aa)	•			0.673
	gerM	Spore germination protein M (353 aa)	•		•	0.662
	argS	Arginyl-tRNA synthetase (557 aa)	•			0.636

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Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:

Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining

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