luxS protein (Bacillus pumilus) - STRING interaction network

This is the evidence view. Different line colors represent the types of evidence for the association.




confidence	evidence	actions	interactive	advanced	more	less	save

Your Input:
	luxS	S-ribosylhomocysteine lyase; Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD) (By similarity) (157 aa)
		(Bacillus pumilus)
Predicted Functional Partners:
	mtnN	5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase; Catalyzes the irreversible cleavage [...] (231 aa)	•	•	•	•	0.998
	metE	5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; Catalyzes the transfer o [...] (762 aa)	•		•	•	0.950
	yrhB	Cystathionine beta-lyase (382 aa)	•		•	•	0.932
	yjcJ	Cystathionine beta-lyase (392 aa)	•		•	•	0.920
	yjcI	Cystathionine beta-lyase (372 aa)	•		•	•	0.920
	BPUM_0854	O-acetylhomoserine aminocarboxypropyltransferase (431 aa)	•		•		0.902
	yitJ	bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase (NAD(P)H) (613 aa)			•		0.899
	BPUM_1026	Methionine synthase (1142 aa)			•		0.899
	mmuM	Homocysteine S-methyltransferase (312 aa)			•		0.899
	yrrT	Possible S-adenosylmethionine(SAM)-dependent methyltransferase (213 aa)	•			•	0.717

Views:

Info & Parameters ...

Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:

Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining

required confidence (score):

interactors shown:

or custom value:

or custom limit:

additional (white) nodes		or: network depth