version_number_image
 
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
luxS
S-ribosylhomocysteine lyase; Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD) (164 aa)
(Campylobacter jejuni 81116)
Predicted Functional Partners:
pfs
5'-methylthioadenosine nucleosidase / S-adenosylhomocysteine nucleosidase (228 aa)
• •  •• 0.997
metC
Putative cystathionine beta-lyase, N-terminus (387 aa)
•    •• 0.964
metE
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; Catalyzes the transfer o [...] (754 aa)
•    •• 0.954
C8J_1256
FlaA flagellin protein (Flagellin A) (Flagellin short variable region); Flagellin is the subuni [...] (576 aa)
      • 0.810
gpsA
glycerol-3-phosphate dehydrogenase NAD(P)-depenent (297 aa)
•       0.730
metK
S-adenosylmethionine synthetase (398 aa)
•     • 0.690
cysM
Cysteine synthase B (299 aa)
•     • 0.664
gatB
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Allows the formation of correctly c [...] (472 aa)
•       0.648
uvrB
UvrABC system protein B; The UvrABC repair system catalyzes the recognition and processing of D [...] (657 aa)
•     • 0.626
pyrC2
dihydroorotase, putative (392 aa)
•       0.624
 
  Views:                    
   Neighborhood  Fusion  Occurence  Coexpression  Experiments  Database  Textmining      Summary Network

 

Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.
Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:
additional (white) nodes         or: network depth