version_number_image
 
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
Spea_3107
rRNA (Guanine-N(2)-)-methyltransferase (424 aa)
(Shewanella pealeana)
Predicted Functional Partners:
Spea_3106
2OG-Fe(II) oxygenase (235 aa)
       0.624
Spea_0597
rRNA (Guanine-N(2)-)-methyltransferase (341 aa)
    0.492
Spea_2626
protein of unknown function DUF45 (168 aa)
       0.452
nadE
NH(3)-dependent NAD(+) synthetase (276 aa)
       0.448
Spea_3110
Uncharacterized lipoprotein (201 aa)
       0.447
Spea_3105
BolA family protein (99 aa)
       0.424
Spea_3113
Major facilitator superfamily MFS_1 (476 aa)
       0.412
 
  Views:                    
   Neighborhood  Fusion  Occurence  Coexpression  Experiments  Database  Textmining      Summary Network

 

Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:

additional (white) nodes         or: network depth