Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A0A072U542 | G7I5E7_MEDTR | A0A072U542 | G7I5E7 | Protein disulfide isomerase-like protein; Belongs to the protein disulfide isomerase family. | Basic helix-loop-helix transcription factor. | 0.596 |
A0A072UQ46 | G7I5E7_MEDTR | A0A072UQ46 | G7I5E7 | Phytochrome and flowering time regulatory protein. | Basic helix-loop-helix transcription factor. | 0.711 |
A0A072UWX4 | B1NY81_MEDTR | A0A072UWX4 | B1NY81 | Small ubiquitin-related modifier. | Cold-acclimation specific protein 31; Belongs to the plant dehydrin family. | 0.420 |
A0A072UWX4 | G7I5E7_MEDTR | A0A072UWX4 | G7I5E7 | Small ubiquitin-related modifier. | Basic helix-loop-helix transcription factor. | 0.504 |
B1NY81_MEDTR | A0A072UWX4 | B1NY81 | A0A072UWX4 | Cold-acclimation specific protein 31; Belongs to the plant dehydrin family. | Small ubiquitin-related modifier. | 0.420 |
B1NY81_MEDTR | G7I5E7_MEDTR | B1NY81 | G7I5E7 | Cold-acclimation specific protein 31; Belongs to the plant dehydrin family. | Basic helix-loop-helix transcription factor. | 0.592 |
G7I5E7_MEDTR | A0A072U542 | G7I5E7 | A0A072U542 | Basic helix-loop-helix transcription factor. | Protein disulfide isomerase-like protein; Belongs to the protein disulfide isomerase family. | 0.596 |
G7I5E7_MEDTR | A0A072UQ46 | G7I5E7 | A0A072UQ46 | Basic helix-loop-helix transcription factor. | Phytochrome and flowering time regulatory protein. | 0.711 |
G7I5E7_MEDTR | A0A072UWX4 | G7I5E7 | A0A072UWX4 | Basic helix-loop-helix transcription factor. | Small ubiquitin-related modifier. | 0.504 |
G7I5E7_MEDTR | B1NY81_MEDTR | G7I5E7 | B1NY81 | Basic helix-loop-helix transcription factor. | Cold-acclimation specific protein 31; Belongs to the plant dehydrin family. | 0.592 |
G7I5E7_MEDTR | G7IDU4_MEDTR | G7I5E7 | G7IDU4 | Basic helix-loop-helix transcription factor. | Protein disulfide isomerase-like protein; Belongs to the protein disulfide isomerase family. | 0.596 |
G7I5E7_MEDTR | G7II21_MEDTR | G7I5E7 | G7II21 | Basic helix-loop-helix transcription factor. | Protein disulfide isomerase-like protein. | 0.596 |
G7I5E7_MEDTR | G7IRR6_MEDTR | G7I5E7 | G7IRR6 | Basic helix-loop-helix transcription factor. | Protein disulfide-isomerase. | 0.596 |
G7I5E7_MEDTR | G7JPD1_MEDTR | G7I5E7 | G7JPD1 | Basic helix-loop-helix transcription factor. | Protein disulfide-isomerase. | 0.596 |
G7I5E7_MEDTR | G7KH66_MEDTR | G7I5E7 | G7KH66 | Basic helix-loop-helix transcription factor. | Protein disulfide isomerase-like protein; Belongs to the protein disulfide isomerase family. | 0.596 |
G7I5E7_MEDTR | PRX2 | G7I5E7 | A4UN77 | Basic helix-loop-helix transcription factor. | Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. | 0.690 |
G7IDU4_MEDTR | G7I5E7_MEDTR | G7IDU4 | G7I5E7 | Protein disulfide isomerase-like protein; Belongs to the protein disulfide isomerase family. | Basic helix-loop-helix transcription factor. | 0.596 |
G7II21_MEDTR | G7I5E7_MEDTR | G7II21 | G7I5E7 | Protein disulfide isomerase-like protein. | Basic helix-loop-helix transcription factor. | 0.596 |
G7IRR6_MEDTR | G7I5E7_MEDTR | G7IRR6 | G7I5E7 | Protein disulfide-isomerase. | Basic helix-loop-helix transcription factor. | 0.596 |
G7IRR6_MEDTR | G7KH66_MEDTR | G7IRR6 | G7KH66 | Protein disulfide-isomerase. | Protein disulfide isomerase-like protein; Belongs to the protein disulfide isomerase family. | 0.439 |
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