Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A0A072UNL3 | A0A072VQ82 | A0A072UNL3 | A0A072VQ82 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Auxin-induced protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations. | 0.660 |
A0A072UNL3 | G7I6V9_MEDTR | A0A072UNL3 | G7I6V9 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Putative transcription factor MYB family. | 0.685 |
A0A072VQ82 | A0A072UNL3 | A0A072VQ82 | A0A072UNL3 | Auxin-induced protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.660 |
A0A072VQ82 | G7I6V9_MEDTR | A0A072VQ82 | G7I6V9 | Auxin-induced protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations. | Putative transcription factor MYB family. | 0.417 |
A0A072VQ82 | G7ZUX1_MEDTR | A0A072VQ82 | G7ZUX1 | Auxin-induced protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations. | p300/CBP acetyltransferase-like protein. | 0.404 |
A0A072VVB0 | B7TX67_MEDTR | A0A072VVB0 | B7TX67 | Putative phosphatidylethanolamine-binding protein. | MADS-box transcription factor. | 0.700 |
A0A072VVB0 | G7I6V9_MEDTR | A0A072VVB0 | G7I6V9 | Putative phosphatidylethanolamine-binding protein. | Putative transcription factor MYB family. | 0.505 |
A7UQU8_MEDTR | G7I6V9_MEDTR | A7UQU8 | G7I6V9 | Aspartate/glutamate/uridylate kinase family protein, putative. | Putative transcription factor MYB family. | 0.515 |
B7TX67_MEDTR | A0A072VVB0 | B7TX67 | A0A072VVB0 | MADS-box transcription factor. | Putative phosphatidylethanolamine-binding protein. | 0.700 |
B7TX67_MEDTR | G7I6V9_MEDTR | B7TX67 | G7I6V9 | MADS-box transcription factor. | Putative transcription factor MYB family. | 0.508 |
B7TX67_MEDTR | G7ITR2_MEDTR | B7TX67 | G7ITR2 | MADS-box transcription factor. | Putative phosphatidylethanolamine-binding protein. | 0.700 |
B7TX67_MEDTR | G7L629_MEDTR | B7TX67 | G7L629 | MADS-box transcription factor. | Putative phosphatidylethanolamine-binding protein. | 0.700 |
B7TX67_MEDTR | MTR_0020s0120 | B7TX67 | G7ZV36 | MADS-box transcription factor. | Putative phosphatidylethanolamine-binding protein. | 0.700 |
G7I6V9_MEDTR | A0A072UNL3 | G7I6V9 | A0A072UNL3 | Putative transcription factor MYB family. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.685 |
G7I6V9_MEDTR | A0A072VQ82 | G7I6V9 | A0A072VQ82 | Putative transcription factor MYB family. | Auxin-induced protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations. | 0.417 |
G7I6V9_MEDTR | A0A072VVB0 | G7I6V9 | A0A072VVB0 | Putative transcription factor MYB family. | Putative phosphatidylethanolamine-binding protein. | 0.505 |
G7I6V9_MEDTR | A7UQU8_MEDTR | G7I6V9 | A7UQU8 | Putative transcription factor MYB family. | Aspartate/glutamate/uridylate kinase family protein, putative. | 0.515 |
G7I6V9_MEDTR | B7TX67_MEDTR | G7I6V9 | B7TX67 | Putative transcription factor MYB family. | MADS-box transcription factor. | 0.508 |
G7I6V9_MEDTR | G7ITR2_MEDTR | G7I6V9 | G7ITR2 | Putative transcription factor MYB family. | Putative phosphatidylethanolamine-binding protein. | 0.505 |
G7I6V9_MEDTR | G7K5A8_MEDTR | G7I6V9 | G7K5A8 | Putative transcription factor MYB family. | Putative transcription factor AP2-EREBP family. | 0.517 |
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