STRINGSTRING
G7IP35_MEDTR G7IP35_MEDTR G7J2H6_MEDTR G7J2H6_MEDTR G7KSG1_MEDTR G7KSG1_MEDTR CDC16 CDC16 G7K6S4_MEDTR G7K6S4_MEDTR G7JRT3_MEDTR G7JRT3_MEDTR G7JA67_MEDTR G7JA67_MEDTR G7JCB5_MEDTR G7JCB5_MEDTR G7K258_MEDTR G7K258_MEDTR I3SVT4_MEDTR I3SVT4_MEDTR B7FH99_MEDTR B7FH99_MEDTR
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G7IP35_MEDTRAuxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). (908 aa)    
Predicted Functional Partners:
G7J2H6_MEDTR
Mitotic spindle assembly checkpoint MAD2B-like protein.
   
 0.788
G7KSG1_MEDTR
Transcription initiation factor TFIID subunit 10; TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription; Belongs to the TAF10 family.
    
 0.775
CDC16
Putative 43kDa postsynaptic protein.
   
 0.759
G7K6S4_MEDTR
Transcription initiation factor TFIID protein, putative.
   
 0.758
G7JRT3_MEDTR
Putative transcription factor WD40-like family.
    
 0.746
G7JA67_MEDTR
Transcription initiation factor TFIID subunit-like protein.
    
 0.741
G7JCB5_MEDTR
Protein arginine N-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily.
   
 0.733
G7K258_MEDTR
Putative anaphase-promoting complex subunit 1.
    
 0.733
I3SVT4_MEDTR
Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.
    
 0.733
B7FH99_MEDTR
Putative transcription factor Hap3/NF-YB family.
    
 0.712
Your Current Organism:
Medicago truncatula
NCBI taxonomy Id: 3880
Other names: M. truncatula, Medicago truncatula Gaertn., barrel medic
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