STRINGSTRING
G7IRK1_MEDTR G7IRK1_MEDTR Q2MGQ5_MEDTR Q2MGQ5_MEDTR G7JJ22_MEDTR G7JJ22_MEDTR A0A072UZ49 A0A072UZ49 G7J7Y6_MEDTR G7J7Y6_MEDTR G7KK14_MEDTR G7KK14_MEDTR A0A072V3N9 A0A072V3N9 G7J0D1_MEDTR G7J0D1_MEDTR G7LG09_MEDTR G7LG09_MEDTR G7LG88_MEDTR G7LG88_MEDTR A0A072TX39 A0A072TX39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G7IRK1_MEDTRDehydration-responsive element-binding protein. (188 aa)    
Predicted Functional Partners:
Q2MGQ5_MEDTR
RPB3 DNA-directed RNA polymerase II subunit 3.
   
 0.751
G7JJ22_MEDTR
SNF2 family amino-terminal protein.
   
 0.689
A0A072UZ49
Actin-related protein ARP4; Belongs to the actin family.
    
 0.658
G7J7Y6_MEDTR
Putative peptidase M24, FACT complex subunit Spt16p/Cdc68p, creatinase/Aminopeptidase P/Spt16.
    
 
 0.653
G7KK14_MEDTR
Putative peptidase M24, FACT complex subunit Spt16p/Cdc68p, creatinase/Aminopeptidase P/Spt16.
    
 
 0.653
A0A072V3N9
High mobility group B-like protein.
    
 0.651
G7J0D1_MEDTR
Putative transcription factor & chromatin remodeling ARID-HMG family.
    
 0.651
G7LG09_MEDTR
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.651
G7LG88_MEDTR
DNA-directed RNA polymerase, putative.
   
 0.651
A0A072TX39
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.650
Your Current Organism:
Medicago truncatula
NCBI taxonomy Id: 3880
Other names: M. truncatula, Medicago truncatula Gaertn., barrel medic
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