STRINGSTRING
G7KUN6_MEDTR G7KUN6_MEDTR G7IFW3_MEDTR G7IFW3_MEDTR G7IAE4_MEDTR G7IAE4_MEDTR A0A072V8V6 A0A072V8V6 G7IAC4_MEDTR G7IAC4_MEDTR G7KVK4_MEDTR G7KVK4_MEDTR A0A072TMC5 A0A072TMC5 G7L550_MEDTR G7L550_MEDTR G7J905_MEDTR G7J905_MEDTR G7KH91_MEDTR G7KH91_MEDTR G7LBF6_MEDTR G7LBF6_MEDTR
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G7KUN6_MEDTRHelix loop helix DNA-binding domain protein. (373 aa)    
Predicted Functional Partners:
G7IFW3_MEDTR
Phytochrome protein B.
    
 0.987
G7IAE4_MEDTR
Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region.
    
 0.977
A0A072V8V6
DELLA domain GRAS family transcription factor GAI; Belongs to the GRAS family.
    
 0.932
G7IAC4_MEDTR
Putative transcription factor bHLH family.
     
 
0.900
G7KVK4_MEDTR
Putative transcription factor bHLH family.
     
 
0.900
A0A072TMC5
Putative response regulator and transcription factor RR-A-type family.
    
 
 0.805
G7L550_MEDTR
Putative response regulator and transcription factor RR-A-type family.
    
 
 0.805
G7J905_MEDTR
PRR response regulator.
    
 
 0.791
G7KH91_MEDTR
E3 ubiquitin-protein ligase COP1.
    
 
 0.701
G7LBF6_MEDTR
Putative F-box domain, galactose oxidase/kelch, beta-propeller, kelch-type beta propeller.
      
 0.676
Your Current Organism:
Medicago truncatula
NCBI taxonomy Id: 3880
Other names: M. truncatula, Medicago truncatula Gaertn., barrel medic
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