Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A0A072UMF5 | A0A072URL3 | A0A072UMF5 | A0A072URL3 | Nodule Cysteine-Rich (NCR) secreted peptide. | Putative transcription factor GRAS family; Belongs to the GRAS family. | 0.475 |
A0A072UMF5 | G7IHW4_MEDTR | A0A072UMF5 | G7IHW4 | Nodule Cysteine-Rich (NCR) secreted peptide. | Basic helix loop helix (BHLH) DNA-binding family protein. | 0.408 |
A0A072UMF5 | G7JF67_MEDTR | A0A072UMF5 | G7JF67 | Nodule Cysteine-Rich (NCR) secreted peptide. | DUF4228 domain protein. | 0.460 |
A0A072UMF5 | G7LGI9_MEDTR | A0A072UMF5 | G7LGI9 | Nodule Cysteine-Rich (NCR) secreted peptide. | Putative transcription factor Homobox-WOX family. | 0.458 |
A0A072URL3 | A0A072UMF5 | A0A072URL3 | A0A072UMF5 | Putative transcription factor GRAS family; Belongs to the GRAS family. | Nodule Cysteine-Rich (NCR) secreted peptide. | 0.475 |
A0A072URL3 | G7IXM4_MEDTR | A0A072URL3 | G7IXM4 | Putative transcription factor GRAS family; Belongs to the GRAS family. | Uncharacterized protein. | 0.405 |
A0A072URL3 | G7J880_MEDTR | A0A072URL3 | G7J880 | Putative transcription factor GRAS family; Belongs to the GRAS family. | SAUR-like auxin-responsive family protein. | 0.453 |
A0A072URL3 | G7JF67_MEDTR | A0A072URL3 | G7JF67 | Putative transcription factor GRAS family; Belongs to the GRAS family. | DUF4228 domain protein. | 0.475 |
A0A072URL3 | G7K618_MEDTR | A0A072URL3 | G7K618 | Putative transcription factor GRAS family; Belongs to the GRAS family. | Auxin-induced protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations. | 0.426 |
A0A072URL3 | G7LDL9_MEDTR | A0A072URL3 | G7LDL9 | Putative transcription factor GRAS family; Belongs to the GRAS family. | Transmembrane protein, putative. | 0.434 |
A0A072URL3 | G7LGI9_MEDTR | A0A072URL3 | G7LGI9 | Putative transcription factor GRAS family; Belongs to the GRAS family. | Putative transcription factor Homobox-WOX family. | 0.483 |
A0A072URL3 | G7LH46_MEDTR | A0A072URL3 | G7LH46 | Putative transcription factor GRAS family; Belongs to the GRAS family. | UDP-glucose:glucosyltransferase, putative. | 0.420 |
A0A072VA27 | G7LGI9_MEDTR | A0A072VA27 | G7LGI9 | DUF1685 family protein. | Putative transcription factor Homobox-WOX family. | 0.466 |
A0A072VA27 | G7LH46_MEDTR | A0A072VA27 | G7LH46 | DUF1685 family protein. | UDP-glucose:glucosyltransferase, putative. | 0.417 |
G7IHW4_MEDTR | A0A072UMF5 | G7IHW4 | A0A072UMF5 | Basic helix loop helix (BHLH) DNA-binding family protein. | Nodule Cysteine-Rich (NCR) secreted peptide. | 0.408 |
G7IHW4_MEDTR | G7K618_MEDTR | G7IHW4 | G7K618 | Basic helix loop helix (BHLH) DNA-binding family protein. | Auxin-induced protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations. | 0.406 |
G7IHW4_MEDTR | G7LGI9_MEDTR | G7IHW4 | G7LGI9 | Basic helix loop helix (BHLH) DNA-binding family protein. | Putative transcription factor Homobox-WOX family. | 0.479 |
G7IXM4_MEDTR | A0A072URL3 | G7IXM4 | A0A072URL3 | Uncharacterized protein. | Putative transcription factor GRAS family; Belongs to the GRAS family. | 0.405 |
G7IXM4_MEDTR | G7JF67_MEDTR | G7IXM4 | G7JF67 | Uncharacterized protein. | DUF4228 domain protein. | 0.477 |
G7IXM4_MEDTR | G7K618_MEDTR | G7IXM4 | G7K618 | Uncharacterized protein. | Auxin-induced protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations. | 0.441 |
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