STRING 9.05 
  rpsD protein (Escherichia coli SMS35) - STRING network view
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
rpsD
30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit (By similarity) (206 aa)
(Escherichia coli SMS35)
Predicted Functional Partners:
rpsC
30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S r [...] (233 aa)
   0.999
rpsH
30S ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rR [...] (130 aa)
    0.999
rpsN
30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may a [...] (101 aa)
    0.999
rpsE
30S ribosomal protein S5 (167 aa)
   0.999
rpsK
30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several dispa [...] (129 aa)
   0.999
rpsM
30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts sever [...] (118 aa)
   0.999
rpsG
30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rR [...] (156 aa)
   0.999
rpsL
30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involve [...] (124 aa)
   0.999
rpsS
30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S [...] (92 aa)
   0.999
rpsJ
30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes (By similarity) (103 aa)
   0.999
 
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Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
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