STRING 9.1 
  arnD protein (Salmonella enterica CVM19633) - STRING network view
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
arnD
polysaccharide deacetylase domain protein; Catalyzes the deformylation of 4-deoxy-4-formamido-L- arabinose-phosphoundecaprenol to 4-amino-4-deoxy-L-arabinose- phosphoundecaprenol. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides (By similarity) (299 aa)
(Salmonella enterica CVM19633)
Predicted Functional Partners:
arnA
bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferas [...] (660 aa)
    0.994
arnC
undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Catalyzes the transfer of 4 [...] (327 aa)
    0.993
arnT
4-amino-4-deoxy-L-arabinose transferase; Catalyzes the transfer of the L-Ara4N moiety of the gl [...] (548 aa)
    0.986
arnB
UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Catalyzes the conversion of UDP [...] (385 aa)
     0.974
arnF
hypothetical protein; Translocates 4-amino-4-deoxy-L-arabinose- phosphoundecaprenol (alpha-L-Ar [...] (125 aa)
      0.952
arnE
inner membrane protein YfbW; Translocates 4-amino-4-deoxy-L-arabinose- phosphoundecaprenol (alp [...] (111 aa)
      0.911
hha
hemolysin expression-modulating protein (72 aa)
       0.687
ais
Ais protein; Catalyzes the dephosphorylation of heptose(II) of the outer membrane lipopolysacch [...] (201 aa)
      0.645
cnu
OriC-binding nucleoid-associated protein; The complex formed with H-NS binds to the specific 26 [...] (71 aa)
       0.622
SCH_1279
chorismate mutase (181 aa)
       0.563
 
  Views:                    
   Neighborhood  Fusion  Occurence  Coexpression  Experiments  Database  Textmining      Summary Network

 

Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:

additional (white) nodes

 Server load: low (20%)
Permalink