STRING 9.05 
  rpsH protein (Thermodesulfovibrio yellowstonii) - STRING network view
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
rpsH
ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit (By similarity) (131 aa)
(Thermodesulfovibrio yellowstonii)
Predicted Functional Partners:
rpsQ
ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5 [...] (83 aa)
    0.999
rpsJ
ribosomal protein S10 (101 aa)
   0.999
rpsZ
ribosomal protein S14p/S29e; Binds 16S rRNA, required for the assembly of 30S particles and may [...] (61 aa)
    0.999
rpsK
ribosomal protein S11 (128 aa)
  0.999
rpsM
ribosomal protein S13p/S18e; Located at the top of the head of the 30S subunit, it contacts sev [...] (121 aa)
  0.999
rpsE
ribosomal protein S5 (181 aa)
   0.999
rpsL
30S ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy (By [...] (123 aa)
   0.999
rpsD
ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA w [...] (208 aa)
   0.999
rpsS
ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribo [...] (95 aa)
   0.999
rpsC
ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribos [...] (216 aa)
   0.999
 
  Views:                    
   Neighborhood  Fusion  Occurence  Coexpression  Experiments  Database  Textmining      Summary Network

 

Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:

additional (white) nodes

 Server load: low (11%)
Permalink