Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ADPG2 | AGD5 | Q8RY29 | Q9FL69 | Polygalacturonase ADPG2; Polygalacturonase involved in cell separation in the final stages of pod shatter, in anther dehiscence and in floral organ abscission; Belongs to the glycosyl hydrolase 28 family. | ADP-ribosylation factor GTPase-activating protein AGD5; GTPase-activating protein (GAP) for ADP ribosylation factor (ARF). Mediates clathrin-dependent trafficking of vacuolar cargo from the trans-Golgi network (TGN). Promotes plant growth. Involved in the regulation of membrane trafficking and cell separation during floral organ shedding and abscission. Prevents abscission zone (AZ) cells enlargement. Exhibits ARF-GTPase activity toward ARF1 at TGN. | 0.574 |
| ADPG2 | HSL2 | Q8RY29 | C0LGX3 | Polygalacturonase ADPG2; Polygalacturonase involved in cell separation in the final stages of pod shatter, in anther dehiscence and in floral organ abscission; Belongs to the glycosyl hydrolase 28 family. | LRR receptor-like serine/threonine-protein kinase HSL2; Receptor-like serine/threonine-kinase acting on substrates that controls floral organ abscission. Regulated by the 'INFLORESCENCE DEFICIENT IN ABSCISSION' (IDA) family of ligands. Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. | 0.793 |
| ADPG2 | IDA | Q8RY29 | Q8LAD7 | Polygalacturonase ADPG2; Polygalacturonase involved in cell separation in the final stages of pod shatter, in anther dehiscence and in floral organ abscission; Belongs to the glycosyl hydrolase 28 family. | Protein IDA; Involved in an ethylene-independent separation step of floral abscission. Promotes abscission zone (AZ) cells rounding. May act with RLK5 and HSL2 as ligand-receptor pairs. | 0.598 |
| ADPG2 | IDL1 | Q8RY29 | Q29PV4 | Polygalacturonase ADPG2; Polygalacturonase involved in cell separation in the final stages of pod shatter, in anther dehiscence and in floral organ abscission; Belongs to the glycosyl hydrolase 28 family. | Protein IDA-LIKE 1; Involved in an ethylene-independent separation step of floral abscission. May act with RLK5 and HSL2 as ligand-receptor pairs. | 0.550 |
| AGD5 | ADPG2 | Q9FL69 | Q8RY29 | ADP-ribosylation factor GTPase-activating protein AGD5; GTPase-activating protein (GAP) for ADP ribosylation factor (ARF). Mediates clathrin-dependent trafficking of vacuolar cargo from the trans-Golgi network (TGN). Promotes plant growth. Involved in the regulation of membrane trafficking and cell separation during floral organ shedding and abscission. Prevents abscission zone (AZ) cells enlargement. Exhibits ARF-GTPase activity toward ARF1 at TGN. | Polygalacturonase ADPG2; Polygalacturonase involved in cell separation in the final stages of pod shatter, in anther dehiscence and in floral organ abscission; Belongs to the glycosyl hydrolase 28 family. | 0.574 |
| AGD5 | F27K19_90 | Q9FL69 | Q9LY54 | ADP-ribosylation factor GTPase-activating protein AGD5; GTPase-activating protein (GAP) for ADP ribosylation factor (ARF). Mediates clathrin-dependent trafficking of vacuolar cargo from the trans-Golgi network (TGN). Promotes plant growth. Involved in the regulation of membrane trafficking and cell separation during floral organ shedding and abscission. Prevents abscission zone (AZ) cells enlargement. Exhibits ARF-GTPase activity toward ARF1 at TGN. | ADP-ribosylation factor GTPase-activating protein. | 0.926 |
| AGD5 | HSL2 | Q9FL69 | C0LGX3 | ADP-ribosylation factor GTPase-activating protein AGD5; GTPase-activating protein (GAP) for ADP ribosylation factor (ARF). Mediates clathrin-dependent trafficking of vacuolar cargo from the trans-Golgi network (TGN). Promotes plant growth. Involved in the regulation of membrane trafficking and cell separation during floral organ shedding and abscission. Prevents abscission zone (AZ) cells enlargement. Exhibits ARF-GTPase activity toward ARF1 at TGN. | LRR receptor-like serine/threonine-protein kinase HSL2; Receptor-like serine/threonine-kinase acting on substrates that controls floral organ abscission. Regulated by the 'INFLORESCENCE DEFICIENT IN ABSCISSION' (IDA) family of ligands. Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. | 0.915 |
| CLV3 | HSL2 | Q9XF04 | C0LGX3 | Protein CLAVATA 3; Extracellular signal that regulates meristem maintenance. Acts with CLV1 as a ligand-receptor pair in a signal transduction pathway coordinating growth between adjacent meristematic regions and controlling the balance between meristem cell proliferation and differentiation; Belongs to the CLV3/ESR signal peptide family. | LRR receptor-like serine/threonine-protein kinase HSL2; Receptor-like serine/threonine-kinase acting on substrates that controls floral organ abscission. Regulated by the 'INFLORESCENCE DEFICIENT IN ABSCISSION' (IDA) family of ligands. Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. | 0.790 |
| CLV3 | IDL1 | Q9XF04 | Q29PV4 | Protein CLAVATA 3; Extracellular signal that regulates meristem maintenance. Acts with CLV1 as a ligand-receptor pair in a signal transduction pathway coordinating growth between adjacent meristematic regions and controlling the balance between meristem cell proliferation and differentiation; Belongs to the CLV3/ESR signal peptide family. | Protein IDA-LIKE 1; Involved in an ethylene-independent separation step of floral abscission. May act with RLK5 and HSL2 as ligand-receptor pairs. | 0.651 |
| CLV3 | KNAT1 | Q9XF04 | P46639 | Protein CLAVATA 3; Extracellular signal that regulates meristem maintenance. Acts with CLV1 as a ligand-receptor pair in a signal transduction pathway coordinating growth between adjacent meristematic regions and controlling the balance between meristem cell proliferation and differentiation; Belongs to the CLV3/ESR signal peptide family. | Homeobox protein knotted-1-like 1; May play a role in meristem function, and may be involved in maintaining cells in an undifferentiated, meristematic state, and its expression disappears at the same time the shoot apex undergoes the transition from vegetative to reproductive development. Positive regulator of LATERAL ORGAN BOUNDARIES (LOB). Probably binds to the DNA sequence 5'-TGAC-3'. Able to traffic from the L1 to the L2/L3 layers of the meristem, presumably through plasmodesmata. Belongs to the TALE/KNOX homeobox family. | 0.720 |
| CLV3 | KNAT2 | Q9XF04 | P46640 | Protein CLAVATA 3; Extracellular signal that regulates meristem maintenance. Acts with CLV1 as a ligand-receptor pair in a signal transduction pathway coordinating growth between adjacent meristematic regions and controlling the balance between meristem cell proliferation and differentiation; Belongs to the CLV3/ESR signal peptide family. | Homeobox protein knotted-1-like 2; May play a role in meristem function, and may be involved in maintaining cells in an undifferentiated, meristematic state. Probably binds to the DNA sequence 5'-TGAC-3'. | 0.640 |
| CLV3 | KNAT6 | Q9XF04 | Q84JS6 | Protein CLAVATA 3; Extracellular signal that regulates meristem maintenance. Acts with CLV1 as a ligand-receptor pair in a signal transduction pathway coordinating growth between adjacent meristematic regions and controlling the balance between meristem cell proliferation and differentiation; Belongs to the CLV3/ESR signal peptide family. | Homeobox protein knotted-1-like 6; Plays a role in meristem function. Contributes to the shoot apical meristem (SAM) maintenance and organ separation by controlling boundary establishment in embryo in a CUC1, CUC2 and STM-dependent manner. Involved in maintaining cells in an undifferentiated, meristematic state. Probably binds to the DNA sequence 5'-TGAC-3'. Belongs to the TALE/KNOX homeobox family. | 0.638 |
| F27K19_90 | AGD5 | Q9LY54 | Q9FL69 | ADP-ribosylation factor GTPase-activating protein. | ADP-ribosylation factor GTPase-activating protein AGD5; GTPase-activating protein (GAP) for ADP ribosylation factor (ARF). Mediates clathrin-dependent trafficking of vacuolar cargo from the trans-Golgi network (TGN). Promotes plant growth. Involved in the regulation of membrane trafficking and cell separation during floral organ shedding and abscission. Prevents abscission zone (AZ) cells enlargement. Exhibits ARF-GTPase activity toward ARF1 at TGN. | 0.926 |
| F27K19_90 | HSL2 | Q9LY54 | C0LGX3 | ADP-ribosylation factor GTPase-activating protein. | LRR receptor-like serine/threonine-protein kinase HSL2; Receptor-like serine/threonine-kinase acting on substrates that controls floral organ abscission. Regulated by the 'INFLORESCENCE DEFICIENT IN ABSCISSION' (IDA) family of ligands. Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. | 0.822 |
| HSL2 | ADPG2 | C0LGX3 | Q8RY29 | LRR receptor-like serine/threonine-protein kinase HSL2; Receptor-like serine/threonine-kinase acting on substrates that controls floral organ abscission. Regulated by the 'INFLORESCENCE DEFICIENT IN ABSCISSION' (IDA) family of ligands. Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. | Polygalacturonase ADPG2; Polygalacturonase involved in cell separation in the final stages of pod shatter, in anther dehiscence and in floral organ abscission; Belongs to the glycosyl hydrolase 28 family. | 0.793 |
| HSL2 | AGD5 | C0LGX3 | Q9FL69 | LRR receptor-like serine/threonine-protein kinase HSL2; Receptor-like serine/threonine-kinase acting on substrates that controls floral organ abscission. Regulated by the 'INFLORESCENCE DEFICIENT IN ABSCISSION' (IDA) family of ligands. Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. | ADP-ribosylation factor GTPase-activating protein AGD5; GTPase-activating protein (GAP) for ADP ribosylation factor (ARF). Mediates clathrin-dependent trafficking of vacuolar cargo from the trans-Golgi network (TGN). Promotes plant growth. Involved in the regulation of membrane trafficking and cell separation during floral organ shedding and abscission. Prevents abscission zone (AZ) cells enlargement. Exhibits ARF-GTPase activity toward ARF1 at TGN. | 0.915 |
| HSL2 | CLV3 | C0LGX3 | Q9XF04 | LRR receptor-like serine/threonine-protein kinase HSL2; Receptor-like serine/threonine-kinase acting on substrates that controls floral organ abscission. Regulated by the 'INFLORESCENCE DEFICIENT IN ABSCISSION' (IDA) family of ligands. Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. | Protein CLAVATA 3; Extracellular signal that regulates meristem maintenance. Acts with CLV1 as a ligand-receptor pair in a signal transduction pathway coordinating growth between adjacent meristematic regions and controlling the balance between meristem cell proliferation and differentiation; Belongs to the CLV3/ESR signal peptide family. | 0.790 |
| HSL2 | F27K19_90 | C0LGX3 | Q9LY54 | LRR receptor-like serine/threonine-protein kinase HSL2; Receptor-like serine/threonine-kinase acting on substrates that controls floral organ abscission. Regulated by the 'INFLORESCENCE DEFICIENT IN ABSCISSION' (IDA) family of ligands. Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. | ADP-ribosylation factor GTPase-activating protein. | 0.822 |
| HSL2 | IDA | C0LGX3 | Q8LAD7 | LRR receptor-like serine/threonine-protein kinase HSL2; Receptor-like serine/threonine-kinase acting on substrates that controls floral organ abscission. Regulated by the 'INFLORESCENCE DEFICIENT IN ABSCISSION' (IDA) family of ligands. Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. | Protein IDA; Involved in an ethylene-independent separation step of floral abscission. Promotes abscission zone (AZ) cells rounding. May act with RLK5 and HSL2 as ligand-receptor pairs. | 0.893 |
| HSL2 | IDL1 | C0LGX3 | Q29PV4 | LRR receptor-like serine/threonine-protein kinase HSL2; Receptor-like serine/threonine-kinase acting on substrates that controls floral organ abscission. Regulated by the 'INFLORESCENCE DEFICIENT IN ABSCISSION' (IDA) family of ligands. Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. | Protein IDA-LIKE 1; Involved in an ethylene-independent separation step of floral abscission. May act with RLK5 and HSL2 as ligand-receptor pairs. | 0.923 |
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