STRINGSTRING
COG0164 COG0164 COG0763 COG0763 COG0792 COG0792 COG0336 COG0336 COG0592 COG0592 COG1043 COG1043 COG0236 COG0236 COG0328 COG0328 COG1196 COG1196 COG0417 COG0417 COG0228 COG0228
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
Score
COG0164Ribonuclease HII    
Predicted Functional Partners:
COG0763
Lipid A disaccharide synthetase
  
 
0.895
COG0792
Predicted endonuclease distantly related to archaeal Holliday junction resolvase, YraN/UPF0102 family
 
   0.874
COG0336
tRNA G37 N-methylase TrmD
  
  
0.825
COG0592
DNA polymerase III sliding clamp (beta) subunit, PCNA homolog
  
 
0.811
COG1043
Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase
  
 
0.797
COG0236
Acyl carrier protein
  
 
0.783
COG0328
Ribonuclease HI
  
 
0.777
COG1196
Chromosome segregation ATPase Smc
  
 
0.774
COG0417
DNA polymerase B elongation subunit
  
 
0.772
COG0228
Ribosomal protein S16
  
  
0.762
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