STRINGSTRING
COG1609 COG1609 COG1879 COG1879 COG1653 COG1653 COG2207 COG2207 COG0524 COG0524 COG0366 COG0366 COG2188 COG2188 COG2186 COG2186 COG0745 COG0745 COG1129 COG1129 COG1621 COG1621
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
Score
COG1609DNA-binding transcriptional regulator, LacI/PurR family    
Predicted Functional Partners:
COG1879
ABC-type sugar transport system, periplasmic component, contains N-terminal xre family HTH domain
 
0.991
COG1653
ABC-type glycerol-3-phosphate transport system, periplasmic component
 
0.989
COG2207
AraC-type DNA-binding domain and AraC-containing proteins
  
0.986
COG0524
Sugar or nucleoside kinase, ribokinase family
 
 
0.985
COG0366
Glycosidase/amylase (phosphorylase)
 
0.979
COG2188
DNA-binding transcriptional regulator, GntR family
 
0.976
COG2186
DNA-binding transcriptional regulator, FadR family
 
0.974
COG0745
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain
  
0.971
COG1129
ABC-type sugar transport system, ATPase component
 
 
0.971
COG1621
Sucrose-6-phosphate hydrolase SacC, GH32 family
 
 
0.971
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