RBCL protein (Arabidopsis thaliana)

STRING 9.05

RBCL protein (Arabidopsis thaliana) - STRING network view

This is the evidence view. Different line colors represent the types of evidence for the association.




confidence	evidence	actions	interactive	advanced	more	less	save

Your Input:
	RBCL	unknown protein; large subunit of RUBISCO. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. ; RuBisCO catalyzes two reactions- the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site (By similarity) (479 aa)
		(Arabidopsis thaliana)
Predicted Functional Partners:
	RBCS1A	RBCS1A (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A); copper ion binding / ribulose-bispho [...] (180 aa)	•	•	•	•	•	•	0.997
	ATS2B	ribulose bisphosphate carboxylase small chain 2B / RuBisCO small subunit 2B (RBCS-2B) (ATS2B); [...] (181 aa)	•	•		•	•	•	0.997
	AT5G38430	ribulose bisphosphate carboxylase small chain 1B / RuBisCO small subunit 1B (RBCS-1B) (ATS1B); [...] (181 aa)	•	•		•	•	•	0.996
	PRK	PRK (PHOSPHORIBULOKINASE); ATP binding / phosphoribulokinase/ protein binding; PHOSPHORIBULOKIN [...] (395 aa)	•		•		•	•	0.991
	PGK	PGK (PHOSPHOGLYCERATE KINASE); phosphoglycerate kinase; Encodes cytosolic phosphoglycerate kina [...] (401 aa)	•				•	•	0.987
	PSBA	unknown protein; Encodes chlorophyll binding protein D1, a part of the photosystem II reaction [...] (353 aa)			•			•	0.983
	ATS3B	ribulose bisphosphate carboxylase small chain 3B / RuBisCO small subunit 3B (RBCS-3B) (ATS3B); [...] (186 aa)	•	•		•		•	0.980
	PGK1	PGK1 (PHOSPHOGLYCERATE KINASE 1); phosphoglycerate kinase; nuclear phosphoglycerate kinase (PGK [...] (481 aa)	•				•	•	0.979
	PSAA	unknown protein; Encodes psaA protein comprising the reaction center for photosystem I along wi [...] (750 aa)			•			•	0.973
	PSBD	unknown protein; PSII D2 protein ; One of the two reaction center proteins of photosystem II (P [...] (353 aa)			•			•	0.968

Views:

Info & Parameters ...

Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:

Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining

required confidence (score):

interactors shown:

or custom value:

or custom limit:

additional (white) nodes

Server load: low (12%)

Permalink