STRING 9.1 
  RBCL protein (Arabidopsis thaliana) - STRING network view
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
RBCL
unknown protein; large subunit of RUBISCO. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. ; RuBisCO catalyzes two reactions- the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site (By similarity) (479 aa)
(Arabidopsis thaliana)
Predicted Functional Partners:
ATS2B
ribulose bisphosphate carboxylase small chain 2B / RuBisCO small subunit 2B (RBCS-2B) (ATS2B); [...] (181 aa)
   0.993
RBCS1A
RBCS1A (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A); copper ion binding / ribulose-bispho [...] (180 aa)
  0.993
AT5G38430
ribulose bisphosphate carboxylase small chain 1B / RuBisCO small subunit 1B (RBCS-1B) (ATS1B); [...] (181 aa)
   0.992
PSBA
unknown protein; Encodes chlorophyll binding protein D1, a part of the photosystem II reaction [...] (353 aa)
      0.974
PGK
PGK (PHOSPHOGLYCERATE KINASE); phosphoglycerate kinase; Encodes cytosolic phosphoglycerate kina [...] (401 aa)
      0.973
PGK1
PGK1 (PHOSPHOGLYCERATE KINASE 1); phosphoglycerate kinase; nuclear phosphoglycerate kinase (PGK [...] (481 aa)
      0.971
ATS3B
ribulose bisphosphate carboxylase small chain 3B / RuBisCO small subunit 3B (RBCS-3B) (ATS3B); [...] (186 aa)
    0.965
PRK
PRK (PHOSPHORIBULOKINASE); ATP binding / phosphoribulokinase/ protein binding; PHOSPHORIBULOKIN [...] (395 aa)
    0.961
PSAA
unknown protein; Encodes psaA protein comprising the reaction center for photosystem I along wi [...] (750 aa)
      0.954
ATPB
unknown protein; chloroplast-encoded gene for beta subunit of ATP synthase ; Produces ATP from [...] (498 aa)
      0.943
 
  Views:                    
   Neighborhood  Fusion  Occurence  Coexpression  Experiments  Database  Textmining      Summary Network

 

Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:

additional (white) nodes

 Server load: low (23%)
Permalink