STRINGSTRING
J3LNE0_ORYBR J3LNE0_ORYBR J3N6E4_ORYBR J3N6E4_ORYBR J3NEZ7_ORYBR J3NEZ7_ORYBR J3N6K0_ORYBR J3N6K0_ORYBR J3LGM5_ORYBR J3LGM5_ORYBR J3LNK2_ORYBR J3LNK2_ORYBR J3LBN5_ORYBR J3LBN5_ORYBR J3LQ30_ORYBR J3LQ30_ORYBR J3L5T0_ORYBR J3L5T0_ORYBR J3MVC6_ORYBR J3MVC6_ORYBR J3M308_ORYBR J3M308_ORYBR
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J3LNE0_ORYBRUncharacterized protein. (387 aa)    
Predicted Functional Partners:
J3N6E4_ORYBR
TCP domain-containing protein.
  
 
  0.550
J3NEZ7_ORYBR
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).
  
 
   0.542
J3N6K0_ORYBR
Uncharacterized protein.
  
 
  0.538
J3LGM5_ORYBR
Phytocyanin domain-containing protein.
  
 
  0.536
J3LNK2_ORYBR
OVATE domain-containing protein.
  
    0.534
J3LBN5_ORYBR
Uncharacterized protein.
  
     0.529
J3LQ30_ORYBR
LOB domain-containing protein.
  
     0.527
J3L5T0_ORYBR
Methyltransferase.
  
 
  0.526
J3MVC6_ORYBR
Uncharacterized protein.
  
 
  0.526
J3M308_ORYBR
Methyltransferase.
  
 
  0.523
Your Current Organism:
Oryza brachyantha
NCBI taxonomy Id: 4533
Other names: O. brachyantha, Oryza brachyantha A.Chev. & Roehr., malo sina
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