Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
J3L5T0_ORYBR | J3LBN5_ORYBR | J3L5T0 | J3LBN5 | Methyltransferase. | Uncharacterized protein. | 0.480 |
J3L5T0_ORYBR | J3LGM5_ORYBR | J3L5T0 | J3LGM5 | Methyltransferase. | Phytocyanin domain-containing protein. | 0.416 |
J3L5T0_ORYBR | J3LNE0_ORYBR | J3L5T0 | J3LNE0 | Methyltransferase. | Uncharacterized protein. | 0.526 |
J3L5T0_ORYBR | J3LQ30_ORYBR | J3L5T0 | J3LQ30 | Methyltransferase. | LOB domain-containing protein. | 0.485 |
J3L5T0_ORYBR | J3N6E4_ORYBR | J3L5T0 | J3N6E4 | Methyltransferase. | TCP domain-containing protein. | 0.516 |
J3L5T0_ORYBR | J3NEZ7_ORYBR | J3L5T0 | J3NEZ7 | Methyltransferase. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.503 |
J3LBN5_ORYBR | J3L5T0_ORYBR | J3LBN5 | J3L5T0 | Uncharacterized protein. | Methyltransferase. | 0.480 |
J3LBN5_ORYBR | J3LGM5_ORYBR | J3LBN5 | J3LGM5 | Uncharacterized protein. | Phytocyanin domain-containing protein. | 0.517 |
J3LBN5_ORYBR | J3LNE0_ORYBR | J3LBN5 | J3LNE0 | Uncharacterized protein. | Uncharacterized protein. | 0.529 |
J3LBN5_ORYBR | J3LNK2_ORYBR | J3LBN5 | J3LNK2 | Uncharacterized protein. | OVATE domain-containing protein. | 0.513 |
J3LBN5_ORYBR | J3LQ30_ORYBR | J3LBN5 | J3LQ30 | Uncharacterized protein. | LOB domain-containing protein. | 0.511 |
J3LBN5_ORYBR | J3M308_ORYBR | J3LBN5 | J3M308 | Uncharacterized protein. | Methyltransferase. | 0.514 |
J3LBN5_ORYBR | J3MVC6_ORYBR | J3LBN5 | J3MVC6 | Uncharacterized protein. | Uncharacterized protein. | 0.514 |
J3LBN5_ORYBR | J3N6E4_ORYBR | J3LBN5 | J3N6E4 | Uncharacterized protein. | TCP domain-containing protein. | 0.482 |
J3LBN5_ORYBR | J3N6K0_ORYBR | J3LBN5 | J3N6K0 | Uncharacterized protein. | Uncharacterized protein. | 0.524 |
J3LBN5_ORYBR | J3NEZ7_ORYBR | J3LBN5 | J3NEZ7 | Uncharacterized protein. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.538 |
J3LGM5_ORYBR | J3L5T0_ORYBR | J3LGM5 | J3L5T0 | Phytocyanin domain-containing protein. | Methyltransferase. | 0.416 |
J3LGM5_ORYBR | J3LBN5_ORYBR | J3LGM5 | J3LBN5 | Phytocyanin domain-containing protein. | Uncharacterized protein. | 0.517 |
J3LGM5_ORYBR | J3LNE0_ORYBR | J3LGM5 | J3LNE0 | Phytocyanin domain-containing protein. | Uncharacterized protein. | 0.536 |
J3LGM5_ORYBR | J3LNK2_ORYBR | J3LGM5 | J3LNK2 | Phytocyanin domain-containing protein. | OVATE domain-containing protein. | 0.539 |
page 1 of 5