avaIM protein (Nostoc sp.) - STRING interaction network

This is the evidence view. Different line colors represent the types of evidence for the association.




confidence	evidence	actions	interactive	advanced	more	less	save

Your Input:
	avaIM	Modification methylase AvaI; This methylase recognizes the double-stranded sequence CYCGRG, causes specific methylation on C-? on both strands, and protects the DNA from cleavage by the avaI endonuclease (By similarity) (482 aa)
		(Nostoc sp.)
Predicted Functional Partners:
	avaIR	Type-2 restriction enzyme AvaI; Recognizes the double-stranded sequence CYCGRG and cleaves afte [...] (315 aa)	•		0.952
	alr5220	hypothetical protein (108 aa)		•	0.736
	all5023	hypothetical protein (347 aa)		•	0.717
	alr5010	D-hydantoinase (496 aa)		•	0.679
	all1445	hypothetical protein (106 aa)		•	0.675
	alr1401	hypothetical protein (193 aa)		•	0.652
	alr4952	hypothetical protein (130 aa)		•	0.616
	all5022	Aldehyde dehydrogenase (473 aa)		•	0.521
	all4981	hypothetical protein (646 aa)		•	0.520
	all3633	Glucanase (346 aa)	•		0.486

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Info & Parameters ...

Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:

Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining

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interactors shown:

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additional (white) nodes		or: network depth