GyrA protein (Mycobacterium smegmatis) - STRING interaction network

This is the evidence view. Different line colors represent the types of evidence for the association.




confidence	evidence	actions	interactive	advanced	more	less	save

Your Input:
	GyrA	DNA topoisomerase (ATP-hydrolysing) (Dna gyrase); DNA gyrase negatively supercoils closed circular double- stranded DNA in an ATP-dependent manner and also catalyzes the interconversion of other topological isomers of double-stranded DNA rings, including catenanes and knotted rings (842 aa)
		(Mycobacterium smegmatis)
Predicted Functional Partners:
	MSMEG_0005	DNA gyrase subunit B; DNA gyrase negatively supercoils closed circular double- stranded DNA in [...] (675 aa)	•	•	•	•	•	•	0.999
	GyrB	DNA gyrase, B subunit (639 aa)	•	•	•	•	•	•	0.999
	recF	DNA replication and repair protein recF; The recF protein is involved in DNA metabolism; it is [...] (384 aa)	•					•	0.900
	dnaA	Chromosomal replication initiator protein dnaA; Plays an important role in the initiation and r [...] (504 aa)	•					•	0.823
	dnaN	DNA polymerase III subunit beta; DNA polymerase III is a complex, multichain enzyme responsible [...] (397 aa)	•					•	0.820
	MSMEG_0457	DNA topoisomerase IV subunit B (677 aa)	•		•			•	0.803
	coaD	Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- [...] (158 aa)	•					•	0.727
	cmk	Cytidylate kinase (228 aa)	•						0.716
	rpoB	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcript [...] (1169 aa)						•	0.706
	serS	Seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoac [...] (417 aa)	•						0.704

Views:

Info & Parameters ...

Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:

Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining

required confidence (score):

interactors shown:

or custom value:

or custom limit:

additional (white) nodes		or: network depth